1) Did you fill form 10E and uploaded - most probably not - OK do the following
2) Log in to efiling website. then Efile--> fill form other than ITR--> select assesment year--> select form no 10E
3) First tab is instructions - second tab is form 10E - third tab is Annexure -I which consists of arrears or advance of salary. You need not fill Annex -II, IIa, III, Iv. as you can see these dont pertain to you. SO FILL ONLY 10E AND Annex 1.
4) Fill it and submit.
5) Now go to accounts --> rectification --> fill the necessary details like AY and Comm No. Just say reprocess the case.
I hope this should work